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snakedeploy
|
public |
Helper for deploying published Snakemake pipelines.
|
2025-04-22 |
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dipcall
|
public |
Dipcall is a reference-based variant calling pipeline for a pair of phased haplotype assemblies.
|
2025-04-22 |
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libmaus2
|
public |
Collection of data structures and algorithms for NGS data.
|
2025-04-22 |
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gunc
|
public |
Python package for detection of chimerism and contamination in prokaryotic genomes.
|
2025-04-22 |
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raptor
|
public |
Raptor: A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences
|
2025-04-22 |
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nanocompore
|
public |
Nanocompore identifies raw signal changes between two conditions dRNA-Seq data.
|
2025-04-22 |
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openduck
|
public |
Open source library for dynamic undocking (DUck)
|
2025-04-22 |
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r-sceasy
|
public |
A package providing functions to convert between different single-cell data formats.
|
2025-04-22 |
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altamisa
|
public |
Alternative Python API for accessing ISA-tab files.
|
2025-04-22 |
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scanpy-scripts
|
public |
Scripts for using scanpy from the command line
|
2025-04-22 |
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arb-bio-devel
|
public |
ARB 6 Sequence Analysis Suite
|
2025-04-22 |
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arb-bio-tools
|
public |
ARB 6 Sequence Analysis Suite
|
2025-04-22 |
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libarbdb
|
public |
ARB 6 Sequence Analysis Suite
|
2025-04-22 |
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perl-math-random-mt-auto
|
public |
Auto-seeded Mersenne Twister PRNGs
|
2025-04-22 |
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perl-unicode-utf8
|
public |
Encoding and decoding of UTF-8 encoding form
|
2025-04-22 |
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pbmm2
|
public |
A minimap2 frontend for PacBio native data formats
|
2025-04-22 |
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perl-package-stash-xs
|
public |
faster and more correct implementation of the Package::Stash API
|
2025-04-22 |
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perl-list-moreutils-xs
|
public |
Provide the stuff missing in List::Util in XS
|
2025-04-22 |
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perl-storable
|
public |
persistence for Perl data structures
|
2025-04-22 |
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grid
|
public |
Growth Rate Index (GRiD) measures bacterial growth rate from reference genomes (including draft quality genomes) and metagenomic bins at ultra-low sequencing coverage (> 0.2x).
|
2025-04-22 |
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logol
|
public |
Logol is a pattern matching grammar language and a set of tools to search a pattern in a sequence (nucleic or proteic)
|
2025-04-22 |
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genomelake
|
public |
Simple and efficient random access to genomic data for deep learning models.
|
2025-04-22 |
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r-biclust
|
public |
The main function biclust provides several algorithms to find biclusters in two-dimensional data: Cheng and Church, Spectral, Plaid Model, Xmotifs and Bimax. In addition, the package provides methods for data preprocessing (normalization and discretisation), visualisation, and validation of bicluster solutions.
|
2025-04-22 |
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perl-class-xsaccessor
|
public |
Generate fast XS accessors without runtime compilation
|
2025-04-22 |
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perl-mime-base64
|
public |
The RFC 2045 encodings; base64 and quoted-printable
|
2025-04-22 |
