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esme_netcdf-c_openmpi_4_1_6
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public |
NetCDF-C - netCDF interface for C
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2025-04-22 |
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esme_pnetcdf_mpich_4_2_3
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public |
PnetCDF - Parallel netCDF
|
2025-04-22 |
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esme_esmf_mpich_4_2_3
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public |
ESMF - Earth System Modeling Framework
|
2025-04-22 |
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esme_omb_mpich_4_2_3
|
public |
OSU Micro Benchmarks
|
2025-04-22 |
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esme_mpich_4_2_3
|
public |
Earth System Modelling Environment (ESME) - A bundle for scientific computing packages for climate modelling with MPI support.
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2025-04-22 |
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esme_hdf5_mpich_4_2_3
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public |
HDF5 - Hierarchical Data Format 5
|
2025-04-22 |
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esme_pio_mpich_4_2_3
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public |
ParallelIO - High-level parallel I/O library
|
2025-04-22 |
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esme_netcdf-fortran_mpich_4_2_3
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public |
NetCDF-Fortran - netCDF interface for Fortran
|
2025-04-22 |
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esme_netcdf-c_mpich_4_2_3
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public |
NetCDF-C - netCDF interface for C
|
2025-04-22 |
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adas
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public |
adas is a sequence database search engine for long sequences. It is an innovative application of Minimizer, MinHash, Coreset and Hierarchical Navigable Small World Graphs (HNSW)
|
2025-04-22 |
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corona_lineage_dynamics
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public |
Analyzing and visualizing pangolin lineages of GISAID metadata.
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2025-04-22 |
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vpt-segmentation-packing
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public |
Packs cell boundaries for the Vizgen vzg2 file format
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2025-04-22 |
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muset
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public |
A pipeline for building an abundance unitig matrix from FASTA/FASTQ files
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2025-04-22 |
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magneto
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public |
MAGNETO is an automated snakemake workflow dedicated to MAG reconstruction from metagenomic data.
|
2025-04-22 |
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ctyper
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public |
Genotyping sequence-resolved copy-number variation using pangenomes.
|
2025-04-22 |
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spp-dcj
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public |
A tool for solving the small parsimony problem for natural genomes
|
2025-04-22 |
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a3partitioner
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public |
A bioinformatics tool for creating APOBEC3 and non-APOBEC3 partitions
|
2025-04-22 |
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egap
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public |
EGAP pipeline for genome assembly and QC analysis
|
2025-04-22 |
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pb-cpg-tools
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public |
Collection of tools for the analysis of CpG data
|
2025-04-22 |
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get_pangenes
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public |
A versatile software package for calling pangenes from whole genome alignments
|
2025-04-22 |
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haplogrep3
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public |
A tool for mtDNA haplogroup classification.
|
2025-04-22 |
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frag_gene_scan_rs
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public |
Rust implementation of the gene prediction model for short and error-prone reads
|
2025-04-22 |
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autobigs-cli
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public |
A CLI tool to rapidly fetch fetch MLST profiles given sequences for various diseases.
|
2025-04-22 |
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autobigs-engine
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public |
A library to rapidly fetch fetch MLST profiles given sequences for various diseases.
|
2025-04-22 |
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nafcodec
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public |
PyO3 bindings and Python interface to nafcodec, an encoder/decoder for Nucleotide Archive Format (NAF) files.
|
2025-04-22 |
