| Package Name | Access | Summary | Updated |
|---|---|---|---|
| snakemake | public | A popular workflow management system aiming at full in-silico reproducibility. | 2025-10-04 |
| r-cnaqc | public | Copy number quality control | 2025-10-04 |
| panorama | public | A robust pangenome-based method for predicting and comparing biological systems across species. | 2025-10-04 |
| bactopia-py | public | A Python package for working with Bactopia. | 2025-10-04 |
| meta-neuro | public | Medial Tractography Analysis (MeTA) | 2025-10-03 |
| mikado | public | A Python3 annotation program to select the best gene model in each locus | 2025-10-03 |
| coreprofiler | public | CoreProfiler, a robust and integrable cgMLST software. | 2025-10-03 |
| tooldistillator | public | Tool to extract and aggregate information from different tool outputs to JSON parsable files | 2025-10-03 |
| biobb_godmd | public | Biobb_godmd is a BioBB category for GOdMD tool (protein conformational transitions). | 2025-10-03 |
| godmd | public | GOdMD Conformational Transitions with discrete Molecular Dynamics. | 2025-10-03 |
| paladin | public | Protein Alignment and Detection Interface. | 2025-10-03 |
| parsnp | public | Parsnp is a command-line-tool for efficient microbial core genome alignment and SNP detection. | 2025-10-03 |
| estmapper | public | No Summary | 2025-10-03 |
| phipack | public | Simple, rapid, and statistically efficient test for recombination. | 2025-10-03 |
| wtdbg | public | Wtdbg2: A fuzzy Bruijn graph approach to long noisy reads assembly | 2025-10-03 |
| nordic | public | NORDic: a Network-Oriented package for the Repurposing of Drugs | 2025-10-03 |
| genomescope2 | public | Reference-free profiling of polyploid genomes | 2025-10-03 |
| pkiss | public | RNA secondary structure prediction including K-type and kissing hairpin- pseudoknots. | 2025-10-02 |
| crabs | public | Crabs (Creating Reference databases for Amplicon-Based Sequencing) is a program to download and curate reference databases for eDNA metabarcoding analyses. | 2025-10-02 |
| feems | public | Fast Estimation of Effective Migration Surfaces. | 2025-10-02 |
| r-rubic | public | No Summary | 2025-10-02 |
| isoquant | public | IsoQuant is a tool for reference-based analysis of long RNA reads, such as gene/transcript quantification and discovery. | 2025-10-02 |
| nanomotif | public | Identifying methlyation motifs in nanopore data. | 2025-10-02 |
| t-coffee | public | A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence. | 2025-10-02 |
| gimmemotifs | public | Motif prediction pipeline and various motif-related tools. | 2025-10-02 |
