| Package Name | Access | Summary | Updated |
|---|---|---|---|
| rich-msa | public | A Rich renderable for viewing Multiple Sequence Alignments in the terminal. | 2025-04-22 |
| cytosnake | public | Orchestrating high-dimensional cell morphology data processing pipelines | 2025-04-22 |
| sfs | public | CLI tool for site frequency spectra. | 2025-04-22 |
| tsebra | public | TSEBRA is a combiner tool that selects transcripts from gene predictions based on the support by extrisic evidence in form of introns and start/stop codons. | 2025-04-22 |
| noah-cli | public | a project management tool for reproducible, portable, and streamlined bioinformatics analysis | 2025-04-22 |
| cstag-cli | public | Command line interface of cstag to manipulate the minimap2's CS tag | 2025-04-22 |
| sylph | public | sylph quickly enables querying of genomes against even low-coverage shotgun metagenomes to find nearest neighbour ANI. | 2025-04-22 |
| ms-entropy | public | This package provides a Python implementation of calculating spectral entropy, entropy similarity, and Flash entropy search for mass spectrometry data. | 2025-04-22 |
| happy-python | public | Haploidy and Size Completeness Estimation with Python | 2025-04-22 |
| dnamarkmaker | public | DNAMarkMaker: pipeline to development ARMS and CAPS marker | 2025-04-22 |
| kinship-read | public | Relationship Estimation from Ancient DNA version 2 (READv2) | 2025-04-22 |
| crispector2 | public | Accurate estimation of off-target editing activity from comparative NGS data | 2025-04-22 |
| binny | public | An automated binning algorithm to recover high-quality genomes from complex metagenomic datasets. Note: This is a development version. | 2025-04-22 |
| tadrep | public | TaDRep: Targeted Detection and Reconstruction of Plasmids | 2025-04-22 |
| kmd_hmdb_api_client | public | The KMD HMDB project API Client | 2025-04-22 |
| umi-transfer | public | A tool for transferring Unique Molecular Identifiers (UMIs) from a separate FastQ file. | 2025-04-22 |
| ipapy2 | public | Integrated Probabilistic Annotation (IPA) 2.0 - Python implementation | 2025-04-22 |
| physiofit | public | Calculate extracellular fluxes from metabolite concentrations and biomass data | 2025-04-22 |
| sativa | public | SATIVA Semi-Automatic Taxonomy Improvement and Validation Algorithm | 2025-04-22 |
| arcsv | public | A pipeline to detect SV in archaic human | 2025-04-22 |
| irf | public | Inverted Repeats Finder is a program that detects approximate inverted repeats. | 2025-04-22 |
| vcf2maf-umccr | public | Convert a VCF into a MAF where each variant is annotated to only one of all possible gene isoforms | 2025-04-22 |
| perl-minion-backend-sqlite | public | SQLite backend for Minion job queue | 2025-04-22 |
| perl-mojo-pg | public | Mojolicious PostgreSQL | 2025-04-22 |
| perl-mojo-sqlite | public | A tiny Mojolicious wrapper for SQLite | 2025-04-22 |
