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r-phewas
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public |
Phenome Wide Association Studies (PheWAS) - Functions to perform Phenome Wide Association Studies (PheWAS). These functions include the conversion of ICD9 codes to PheWAS codes (v1.2), statistical analysis, and plotting.
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2025-08-19 |
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tgt
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public |
TextGridTools -- Read, write, and manipulate Praat TextGrid files
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2025-08-19 |
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dragmap
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public |
Dragmap is the Dragen mapper/aligner Open Source Software.
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2025-08-19 |
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unimap
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public |
Unimap is a fork of minimap2 optimized for assembly-to-reference alignment.
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2025-08-19 |
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perl-lwp-protocol-https
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public |
Provide https support for LWP::UserAgent.
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2025-08-19 |
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lra
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public |
Long read aligner for sequences and contigs
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2025-08-19 |
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perl-mozilla-ca
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public |
Mozilla's CA cert bundle in PEM format.
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2025-08-19 |
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perl-test-taint
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public |
Checks for taintedness of variables.
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2025-08-19 |
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heasoft
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public |
NASA High Energy Astrophysics Software (HEAsoft)
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2025-08-19 |
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perl-www-mechanize
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public |
Handy web browsing in a Perl object.
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2025-08-19 |
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perl-text-format
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public |
Format text.
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2025-08-19 |
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perl-image-info
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public |
Extract meta information from image files.
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2025-08-19 |
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pyprophet
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public |
PyProphet: Semi-supervised learning and scoring of OpenSWATH results.
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2025-08-19 |
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r-aroma.core
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public |
Core methods and classes used by higher-level 'aroma.*' packages part of the Aroma Project, e.g. 'aroma.affymetrix' and 'aroma.cn'.
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2025-08-19 |
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esviritu
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public |
Read mapping pipeline for detection and measurement of human and animal virus pathogens from short read metagenomic environmental or clinical samples.
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2025-08-18 |
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folddisco
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public |
Folddisco: fast indexing and search of discontinuous motifs in protein structures
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2025-08-18 |
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krepp
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public |
A k-mer-based maximum likelihood method for estimating distances of reads to genomes and phylogenetic placement of metagenomic samples.
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2025-08-18 |
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r-signac
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public |
A framework for the analysis and exploration of single-cell chromatin data. The 'Signac' package contains functions for quantifying single-cell chromatin data, computing per-cell quality control metrics, dimension reduction and normalization, visualization, and DNA sequence motif analysis.
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2025-08-18 |
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ultraplex
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public |
An all-in-one software package for processing and demultiplexing fastq files.
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2025-08-18 |
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perl-term-detect-software
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public |
Detect terminal (emulator) software and its capabilities.
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2025-08-18 |
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gapmm2
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public |
gapmm2: gapped alignment using minimap2.
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2025-08-18 |
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squirrel
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public |
Some QUIck Reconstruction to Resolve Evolutionary Links.
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2025-08-18 |
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hcluster_sg
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public |
A tool for hierarchically clustering on a sparse graph
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2025-08-18 |
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nanocomp
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public |
Comparing runs of Oxford Nanopore sequencing data and alignments
|
2025-08-18 |
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biocantor
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public |
Coordinate Maniuplation and Genome Annotation Data Model
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2025-08-18 |
