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scoring-matrices
|
public |
Dependency free, Cython-compatible scoring matrices to use with biological sequences.
|
2025-08-13 |
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tetrimmer
|
public |
TETrimmer is designed to replace and assist TE manual curation.
|
2025-08-13 |
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sigprofilerassignment
|
public |
SigProfilerAssignment - Assignment of known mutational signatures to individual samples and individual somatic mutations
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2025-08-13 |
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perbase
|
public |
Per-base metrics on BAM/CRAM files.
|
2025-08-13 |
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mehari
|
public |
VEP-like tool for sequence ontology and HGVS annotation of VCF files written in Rust.
|
2025-08-13 |
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multiqc
|
public |
Create aggregate bioinformatics analysis reports across many samples and tools.
|
2025-08-13 |
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esme_hdf5_mvapich_4_0_ucx
|
public |
HDF5 - Hierarchical Data Format 5
|
2025-08-13 |
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esme_netcdf-c_mvapich_4_0_ucx
|
public |
NetCDF-C - netCDF interface for C
|
2025-08-13 |
|
esme_mvapich_4_0_ucx
|
public |
Earth System Modelling Environment (ESME) - A bundle for scientific computing packages for climate modelling with MPI support.
|
2025-08-13 |
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esme_pnetcdf_mvapich_4_0_ucx
|
public |
PnetCDF - Parallel netCDF
|
2025-08-13 |
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esme_pio_mvapich_4_0_ucx
|
public |
ParallelIO - High-level parallel I/O library
|
2025-08-13 |
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esme_netcdf-fortran_mvapich_4_0_ucx
|
public |
NetCDF-Fortran - netCDF interface for Fortran
|
2025-08-13 |
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esme_esmf_mvapich_4_0_ucx
|
public |
ESMF - Earth System Modeling Framework
|
2025-08-13 |
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skani
|
public |
skani is a fast and robust tool for calculating ANI between metagenome assembled genomes and contigs.
|
2025-08-13 |
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circtools
|
public |
circtools - a circular RNA toolbox.
|
2025-08-12 |
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distree
|
public |
A tool to calculate distances between phylogenetic trees.
|
2025-08-12 |
|
ddprimer
|
public |
Pipeline for designing primers optimized for droplet digital PCR
|
2025-08-12 |
|
ddquint
|
public |
Droplet Digital PCR Multiplex Analysis for chromosomal copy number detection
|
2025-08-12 |
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longcalld
|
public |
longcallD: local-haplotagging-based small and structural variant calling
|
2025-08-12 |
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fstic
|
public |
High-performance Rust tool for computing multiple genetic distance metrics (FST, GST, Jost’s D, etc.) from VCFs or allele-frequency tables, with parallel processing and advanced filtering.
|
2025-08-12 |
|
bioconductor-survcomp
|
public |
Performance Assessment and Comparison for Survival Analysis
|
2025-08-12 |
|
quaqc
|
public |
Quick ATAC-seq Quality Control.
|
2025-08-12 |
|
sr2silo
|
public |
Short-read to SILO format converter.
|
2025-08-12 |
|
stemcnv-check
|
public |
StemCNV-check: CNV Based Quality Control Workflow for Stem Cell SNP Array Data.
|
2025-08-12 |
|
pbsim3
|
public |
A simulator for all types of Pacific Biosciences (PacBio) and Oxford Nanopore Technologies (ONT) long reads
|
2025-08-12 |
