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bio
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public |
Command-line utilities to make bioinformatics explorations more enjoyable.
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2025-05-07 |
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gprofiler-official
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public |
Functional enrichment analysis and more via the g:Profiler toolkit
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2025-05-07 |
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bioconductor-metmashr
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public |
Metabolite Mashing with R
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2025-05-07 |
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flair
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public |
Correction, isoform definition, and alternative splicing analysis of noisy reads (ONT and PacBio).
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2025-05-07 |
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flye
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public |
A fast and accurate de novo assembler for single molecule sequencing reads using repeat graphs.
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2025-05-07 |
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gb-io
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public |
A Python interface to gb-io, a fast GenBank parser and serializer written in Rust.
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2025-05-06 |
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phipack
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public |
Simple, rapid, and statistically efficient test for recombination.
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2025-05-06 |
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bwapy
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public |
Bwapy provides python wrappers for bwa.
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2025-05-06 |
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pixelator
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public |
A command-line tool and library to process and analyze sequencing data from Molecular Pixelation (MPX) assays.
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2025-05-05 |
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capcruncher
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public |
An end-to-end solution for processing Capture-C, Tri-C and Tiled-C data.
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2025-05-03 |
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regtools
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public |
Tools that integrate DNA-seq and RNA-seq data to help interpret mutations in a regulatory and splicing context.
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2025-05-03 |
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subread
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public |
High-performance read alignment, quantification, and mutation discovery.
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2025-05-03 |
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oligon-design
|
public |
Simple and versatile approach to design specific oligonucleotides from large environmental datasets
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2025-05-03 |
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recur
|
public |
Detect recurrent amino-acid substitutions from multiple-sequence alignments.
|
2025-05-02 |
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kernel_density_plots
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public |
Python tool for generating SNP density and closest neighbor plots from aligned SNP FASTA files.
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2025-05-02 |
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bioconductor-structtoolbox
|
public |
Data processing & analysis tools for Metabolomics and other omics
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2025-05-02 |
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frogs
|
public |
FROGS is a workflow designed to metabarcoding sequence analysis
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2025-05-02 |
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aniclustermap
|
public |
A tool for drawing ANI clustermap between all-vs-all microbial genomes
|
2025-05-02 |
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mogaaap
|
public |
MoGAAAP: Modular Genome Assembly, Annotation and quality Assessment Pipeline
|
2025-05-02 |
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viguno
|
public |
Lookup OMIM genes and HPO terms and compute similarities.
|
2025-05-02 |
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varfish-server-worker
|
public |
Rust-based tool for the heavy lifting in varfish-server.
|
2025-05-02 |
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sneep
|
public |
Identify regulatory non-coding SNPs (rSNPs)
|
2025-05-02 |
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pipits
|
public |
PIPITS: An automated pipeline for analyses of fungal internal transcribed spacer (ITS) sequences from the Illumina sequencing platform.
|
2025-05-02 |
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svtk
|
public |
Utilities for consolidating, filtering, resolving, and annotating structural variants.
|
2025-04-30 |
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bioconductor-pics
|
public |
Probabilistic inference of ChIP-seq
|
2025-04-30 |
