| Package Name | Access | Summary | Updated |
|---|---|---|---|
| cyvcf2 | public | A cython wrapper around htslib built for fast parsing of Variant Call Format (VCF) files. | 2025-10-09 |
| commet | public | Comparing and combining multiple metagenomic datasets | 2025-10-09 |
| genesplicer | public | No Summary | 2025-10-08 |
| python-bioext | public | A few handy bioinformatics tools not already in BioPython. | 2025-10-08 |
| transtermhp | public | TransTermHP finds rho-independent transcription terminators in bacterial genomes | 2025-10-08 |
| sift4g | public | SIFT 4G is a faster version of SIFT that enables us to scale up and provide SIFT predictions for more organisms. | 2025-10-08 |
| busco | public | Assessment of assembly completeness using Universal Single Copy Orthologs. | 2025-10-08 |
| python-msgpack | public | It's like JSON. But fast and small. | 2025-10-08 |
| truvari | public | Structural variant comparison tool for VCFs. | 2025-10-08 |
| baitfisher | public | No Summary | 2025-10-08 |
| akt | public | Ancestry and Kinship Tools (AKT) | 2025-10-08 |
| allegro | public | A fast linkage and haplotype analysis utility making use of MTBDD to reduce complexity. | 2025-10-08 |
| gvcfgenotyper | public | A utility for merging and genotyping Illumina-style GVCFs. | 2025-10-07 |
| bbmap | public | BBMap is a short read aligner, as well as various other bioinformatic tools. | 2025-10-07 |
| last | public | LAST finds & aligns related regions of sequences. | 2025-10-07 |
| pyvolve | public | Pyvolve is an open-source Python module for simulating sequences along a phylogenetic tree according to continuous-time Markov models of sequence evolution. | 2025-10-07 |
| hyphy | public | An open-source software package for comparative sequence analysis using stochastic evolutionary models. | 2025-10-07 |
| genometools-genometools | public | GenomeTools genome analysis system. | 2025-10-06 |
| nextflow | public | A DSL for data-driven computational pipelines http://nextflow.io | 2025-10-06 |
| staramr | public | Scan genome contigs against the ResFinder and PointFinder databases | 2025-10-06 |
| dxpy | public | DNAnexus Platform API bindings for Python | 2025-10-06 |
| atac | public | No Summary | 2025-10-06 |
| sim4db | public | No Summary | 2025-10-06 |
| snoscan | public | Search for C/D box methylation guide snoRNA genes in a genomic sequence | 2025-10-06 |
| vsearch | public | A versatile open source tool for metagenomics (USEARCH alternative). | 2025-10-06 |
