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gmap
|
public |
Genomic mapping and alignment program for mRNA and EST sequences.
|
2025-04-22 |
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recon
|
public |
No Summary
|
2025-04-22 |
|
perl-moosex-types
|
public |
Organise your Moose types in libraries.
|
2025-04-22 |
|
truvari
|
public |
Structural variant comparison tool for VCFs.
|
2025-04-22 |
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bioconductor-dnacopy
|
public |
DNA Copy Number Data Analysis
|
2025-04-22 |
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bioconductor-variantannotation
|
public |
Annotation of Genetic Variants
|
2025-04-22 |
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bioconductor-apeglm
|
public |
Approximate posterior estimation for GLM coefficients
|
2025-04-22 |
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bioconductor-scran
|
public |
Methods for Single-Cell RNA-Seq Data Analysis
|
2025-04-22 |
|
bioconductor-rhdf5
|
public |
R Interface to HDF5
|
2025-04-22 |
|
bioconductor-hdf5array
|
public |
HDF5 datasets as array-like objects in R
|
2025-04-22 |
|
perl-aceperl
|
public |
Object-Oriented Access to ACEDB Databases
|
2025-04-22 |
|
perl-params-validate
|
public |
Validate method/function parameters
|
2025-04-22 |
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bioconductor-biovizbase
|
public |
Basic graphic utilities for visualization of genomic data.
|
2025-04-22 |
|
bioconductor-shortread
|
public |
FASTQ input and manipulation
|
2025-04-21 |
|
bioconductor-beachmat
|
public |
Compiling Bioconductor to Handle Each Matrix Type
|
2025-04-21 |
|
bioconductor-dada2
|
public |
Accurate, high-resolution sample inference from amplicon sequencing data
|
2025-04-21 |
|
unifrac
|
public |
Fast phylogenetic diversity calculations
|
2025-04-21 |
|
ucsc-cell-browser
|
public |
A browser for single-cell data, main site at http://cells.ucsc.edu. UCSC Cellbrowser, an interactive browser for single cell data. Includes importers and basic pipelines for text files, Seurat, Scanpy and Cellranger. All Javascript - does not require a server backend.
|
2025-04-21 |
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r-pscbs
|
public |
Segmentation of allele-specific DNA copy number data and detection of regions with abnormal copy number within each parental chromosome. Both tumor-normal paired and tumor-only analyses are supported.
|
2025-04-21 |
|
perl-mime-types
|
public |
Definition of MIME types
|
2025-04-21 |
|
mappy
|
public |
Minimap2 Python binding
|
2025-04-18 |
|
minimap2
|
public |
A versatile pairwise aligner for genomic and spliced nucleotide sequences.
|
2025-04-18 |
|
sentieon
|
public |
Accelerated performance bioinformatics tools for mapping and variant calling
|
2025-04-18 |
|
diamond
|
public |
Accelerated BLAST compatible local sequence aligner.
|
2025-04-18 |
|
rgi
|
public |
This tool provides a preliminary annotation of your DNA sequence(s) based upon the data available in The Comprehensive Antibiotic Resistance Database (CARD). Hits to genes tagged with Antibiotic Resistance ontology terms will be highlighted. As CARD expands to include more pathogens, genomes, plasmids, and ontology terms this tool will grow increasingly powerful in providing first-pass detection of antibiotic resistance associated genes. See license at CARD website
|
2025-04-18 |
