| Package Name | Access | Summary | Updated |
|---|---|---|---|
| ngscheckmate | public | Software package for identifying next generation sequencing (NGS) data files from the same individual. | 2025-04-22 |
| snakedeploy | public | Helper for deploying published Snakemake pipelines. | 2025-04-22 |
| dipcall | public | Dipcall is a reference-based variant calling pipeline for a pair of phased haplotype assemblies. | 2025-04-22 |
| libmaus2 | public | Collection of data structures and algorithms for NGS data. | 2025-04-22 |
| gunc | public | Python package for detection of chimerism and contamination in prokaryotic genomes. | 2025-04-22 |
| raptor | public | Raptor: A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences | 2025-04-22 |
| nanocompore | public | Nanocompore identifies raw signal changes between two conditions dRNA-Seq data. | 2025-04-22 |
| openduck | public | Open source library for dynamic undocking (DUck) | 2025-04-22 |
| r-sceasy | public | A package providing functions to convert between different single-cell data formats. | 2025-04-22 |
| altamisa | public | Alternative Python API for accessing ISA-tab files. | 2025-04-22 |
| scanpy-scripts | public | Scripts for using scanpy from the command line | 2025-04-22 |
| arb-bio-devel | public | ARB 6 Sequence Analysis Suite | 2025-04-22 |
| arb-bio-tools | public | ARB 6 Sequence Analysis Suite | 2025-04-22 |
| libarbdb | public | ARB 6 Sequence Analysis Suite | 2025-04-22 |
| perl-math-random-mt-auto | public | Auto-seeded Mersenne Twister PRNGs | 2025-04-22 |
| perl-unicode-utf8 | public | Encoding and decoding of UTF-8 encoding form | 2025-04-22 |
| pbmm2 | public | A minimap2 frontend for PacBio native data formats | 2025-04-22 |
| perl-package-stash-xs | public | faster and more correct implementation of the Package::Stash API | 2025-04-22 |
| perl-list-moreutils-xs | public | Provide the stuff missing in List::Util in XS | 2025-04-22 |
| perl-storable | public | persistence for Perl data structures | 2025-04-22 |
| grid | public | Growth Rate Index (GRiD) measures bacterial growth rate from reference genomes (including draft quality genomes) and metagenomic bins at ultra-low sequencing coverage (> 0.2x). | 2025-04-22 |
| logol | public | Logol is a pattern matching grammar language and a set of tools to search a pattern in a sequence (nucleic or proteic) | 2025-04-22 |
| genomelake | public | Simple and efficient random access to genomic data for deep learning models. | 2025-04-22 |
| r-biclust | public | The main function biclust provides several algorithms to find biclusters in two-dimensional data: Cheng and Church, Spectral, Plaid Model, Xmotifs and Bimax. In addition, the package provides methods for data preprocessing (normalization and discretisation), visualisation, and validation of bicluster solutions. | 2025-04-22 |
| perl-class-xsaccessor | public | Generate fast XS accessors without runtime compilation | 2025-04-22 |
