|
fa-lint
|
public |
A Fasta linter/validator
|
2025-06-15 |
|
pymlst
|
public |
python Mlst Local Search Tool
|
2025-06-15 |
|
instanovo
|
public |
InstaNovo enables diffusion-powered de novo peptide sequencing in large scale proteomics experiments.
|
2025-06-15 |
|
perl-indirect
|
public |
Lexically warn about using the indirect method call syntax.
|
2025-06-13 |
|
perl-http-message
|
public |
HTTP style message (base class).
|
2025-06-13 |
|
minipolish
|
public |
A tool for Racon polishing miniasm assemblies.
|
2025-06-13 |
|
perl-graphviz
|
public |
Interface to AT&T's GraphViz. Deprecated. See GraphViz2.
|
2025-06-13 |
|
mirmachine
|
public |
A command line to tool detect miRNA homologs in genome sequences.
|
2025-06-13 |
|
perl-parallel-iterator
|
public |
Simple parallel execution.
|
2025-06-13 |
|
perl-file-sharedir-install
|
public |
Install shared files.
|
2025-06-13 |
|
perl-image-exiftool
|
public |
ExifTool is a platform-independent Perl library plus a command-line application for reading, writing and editing meta information in a wide variety of files.
|
2025-06-13 |
|
perl-namespace-autoclean
|
public |
Keep imports out of your namespace
|
2025-06-12 |
|
perl-archive-tar
|
public |
Manipulates TAR archives.
|
2025-06-12 |
|
perl-devel-checklib
|
public |
check that a library is available
|
2025-06-12 |
|
perl-html-form
|
public |
Class that represents an HTML form element.
|
2025-06-12 |
|
conifer
|
public |
Calculate confidence scores from Kraken2 output
|
2025-06-12 |
|
rascaf
|
public |
Scaffolding with RNA-seq read alignment.
|
2025-06-12 |
|
r-ic10
|
public |
Implementation of the classifier described in the paper 'Genome-driven integrated classification of breast cancer validated in over 7,500 samples' (Ali HR et al., Genome Biology 2014). It uses copy number and/or expression form breast cancer data, trains a pamr classifier (Tibshirani et al.) with the features available and predicts the iC10 group.
|
2025-06-12 |
|
rearr
|
public |
Chimeric alignment of CRISPR-seq
|
2025-06-12 |
|
perl-bio-automatedannotation
|
public |
Automated annotation of assemblies.
|
2025-06-12 |
|
perl-gdgraph
|
public |
Produces charts with GD.
|
2025-06-12 |
|
perl-extutils-manifest
|
public |
Utilities to write and check a MANIFEST file.
|
2025-06-12 |
|
actc
|
public |
PacBio utility to align clr to ccs reads
|
2025-06-12 |
|
mbg
|
public |
Minimizer based sparse de Bruijn graph constructor
|
2025-06-12 |
|
pywgsim
|
public |
pywgsim
|
2025-06-12 |
