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tgtools
|
public |
A command-line tool to help manipulate transjson files which are used to store transmission/relatedness networks.
|
2025-06-24 |
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dialign2
|
public |
DIALIGN multiple sequence alignment using various sources of external information
|
2025-06-24 |
|
dnadotplot
|
public |
DNA dot plot generator.
|
2025-06-24 |
|
riblast
|
public |
RIblast is ultrafast RNA-RNA interaction prediction software.
|
2025-06-24 |
|
rfmix
|
public |
RFMix implements a fast discriminative approach to modeling ancestry along an admixed chromosome given observed haplotype sequences of known or inferred ancestry.
|
2025-06-24 |
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galaxy-job-config-init
|
public |
Galaxy configuration.
|
2025-06-24 |
|
bio-ripser
|
public |
Ripser: efficient computation of Vietoris–Rips persistence barcodes.
|
2025-06-24 |
|
plassembler
|
public |
Quickly and accurately assemble plasmids in hybrid sequenced bacterial isolates.
|
2025-06-24 |
|
submission-excel2xml
|
public |
Generate DRA metadata XML files from Excel spreadsheet
|
2025-06-23 |
|
mimick
|
public |
Simulate linked-read data
|
2025-06-23 |
|
bioconductor-scmet
|
public |
Bayesian modelling of cell-to-cell DNA methylation heterogeneity
|
2025-06-23 |
|
perl-io-prompt
|
public |
No Summary
|
2025-06-23 |
|
ucsc-gtftogenepred
|
public |
Convert a GTF file to a genePred.
|
2025-06-23 |
|
r-quilt
|
public |
Rapid and accurate genotype imputation from low coverage short read, long read, and cell free DNA sequence.
|
2025-06-22 |
|
quatradis
|
public |
A set of tools to analyse the output from TraDIS analyses
|
2025-06-22 |
|
caspeak
|
public |
A pipeline for finding non-reference mobile element insertions
|
2025-06-22 |
|
fastlin
|
public |
fastlin, ultra-fast MTBC lineage typing.
|
2025-06-22 |
|
r-stitch
|
public |
STITCH - Sequencing To Imputation Through Constructing Haplotypes.
|
2025-06-22 |
|
ucsc-genepredtobed
|
public |
Convert from genePred to bed format. Does not yet handle genePredExt.
|
2025-06-22 |
|
ucsc-pslcdnafilter
|
public |
Filter cDNA alignments in psl format. Filtering criteria are comparative, selecting near best in genome alignments for each given cDNA and non-comparative, based only on the quality of an individual alignment.
|
2025-06-22 |
|
ucsc-blat
|
public |
Standalone BLAT v. 39x1 fast sequence search command line tool.
|
2025-06-22 |
|
ucsc-bedtogenepred
|
public |
Convert bed format files to genePred format.
|
2025-06-22 |
|
ucsc-liftover
|
public |
Move annotations from one assembly to another.
|
2025-06-22 |
|
ucsc-stringify
|
public |
Convert file to C strings.
|
2025-06-21 |
|
ucsc-fatovcf
|
public |
Extract VCF from a multi-sequence FASTA alignment.
|
2025-06-21 |
