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perl-cgi
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public |
A generic file fetching mechanism.
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2025-07-07 |
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cram-archiver
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public |
A samtools wrapper for CRAM conversion automation.
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2025-07-07 |
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ovrlpy
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public |
A python tool to investigate cell overlaps in imaging-based spatial transcriptomics data.
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2025-07-07 |
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ensembl-utils
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public |
Ensembl Python general-purpose utils
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2025-07-07 |
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gaftools
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public |
gaftools is a fast and comprehensive toolkit designed for processing pangenome alignments in GAF format
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2025-07-07 |
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ncbi-datasets-pyclient
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public |
NCBI Datasets API
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2025-07-07 |
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ervdetective
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public |
An efficient pipeline for identification and annotation of endogenous retroviruses (ERVs).
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2025-07-07 |
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ls-gkm
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public |
gkm-SVM, a sequence-based method for predicting regulatory DNA elements.
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2025-07-03 |
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genome_profiler
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public |
Prokaryotic genome and plasmid profiling pipeline.
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2025-07-03 |
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ultra
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public |
ULTRA is a tool for finding and annotating tandem repeats within genomic sequence.
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2025-07-03 |
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repeatmodeler
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public |
RepeatModeler is a de-novo repeat family identification and modeling package.
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2025-07-03 |
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repeatafterme
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public |
A package for the extension of repetitive DNA sequences.
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2025-07-03 |
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domclust
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public |
Effective tool for orthologous grouping in multiple genomes
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2025-07-03 |
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beast
|
public |
BEAST is a cross-platform program for Bayesian analysis of molecular sequences using MCMC.
|
2025-07-03 |
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primer3-py
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public |
Python bindings for Primer3
|
2025-07-02 |
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bwa-mem2
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public |
The next version of bwa-mem.
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2025-07-02 |
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phasius
|
public |
A rust tool to create phase-block maps from phased cram/bam files.
|
2025-07-02 |
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flash2
|
public |
Merge paired-end reads from fragments that are shorter than twice the read length
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2025-07-02 |
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r-lme4qtl
|
public |
Linear mixed models (lme4) with flexible covariance structure for qtl and association analysis.
|
2025-07-02 |
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panman
|
public |
PanMAN
|
2025-07-02 |
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rabies
|
public |
RABIES: Rodent Automated Bold Improvement of EPI Sequences.
|
2025-07-02 |
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nordic
|
public |
NORDic: a Network-Oriented package for the Repurposing of Drugs
|
2025-07-02 |
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endorspy
|
public |
endorS.py calculates endogenous DNA from samtools flagstat files and print to screen.
|
2025-07-02 |
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crispresso2
|
public |
A software pipeline designed to enable rapid and intuitive interpretation of genome editing experiments.
|
2025-07-02 |
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phabox
|
public |
Virus identification and analysis tool set
|
2025-07-02 |
