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rad

Community

Read-structure Agnostic Demultiplexer for long-read single-cell RNA-seq.

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::rad

Usage Tracking

0.6.0
1 / 8 versions selected
Downloads (Last 6 months): 0

Description

rad implements an alignment-based demultiplexer and whitelist/barcode-correction suite for Nanopore and PacBio single-cell long-read experiments. It bundles edlib and csv-parser in-tree, and depends only on Boost, zlib, and some flavor of openMP.

About

Summary

Read-structure Agnostic Demultiplexer for long-read single-cell RNA-seq.

Last Updated

May 13, 2025 at 03:21

License

MIT

Total Downloads

322

Supported Platforms

linux-aarch64
linux-64
macOS-arm64
macOS-64