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Read-structure Agnostic Demultiplexer for long-read single-cell RNA-seq.

Installers

  • linux-aarch64 v0.6.0
  • linux-64 v0.6.0
  • osx-arm64 v0.6.0
  • osx-64 v0.6.0

conda install

To install this package run one of the following:
conda install bioconda::rad

Description

rad implements an alignment-based demultiplexer and whitelist/barcode-correction suite for Nanopore and PacBio single-cell long-read experiments. It bundles edlib and csv-parser in-tree, and depends only on Boost, zlib, and some flavor of openMP.


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