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r-pophelper

Community

A set of useful functions for processing admixture proportion files from the population structure analysis softwares STRUCTURE, TESS, ADMIXTURE, BAPS, fastSTRUCTURE etc. The package contains functions to read runs, tabulate runs, summarise runs, plot runs, estimate K using Evanno method, export clumpp files, export distruct files and generate barplots.

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::r-pophelper

Usage Tracking

2.3.1
2.3.0
2.2.7
3 / 8 versions selected
Downloads (Last 6 months): 0

About

Summary

A set of useful functions for processing admixture proportion files from the population structure analysis softwares STRUCTURE, TESS, ADMIXTURE, BAPS, fastSTRUCTURE etc. The package contains functions to read runs, tabulate runs, summarise runs, plot runs, estimate K using Evanno method, export clumpp files, export distruct files and generate barplots.

Last Updated

Dec 29, 2020 at 14:12

License

GPL-3

Total Downloads

12.4K

Supported Platforms

noarch

Unsupported Platforms

linux-64 Last supported version: 2.2.7
macOS-64 Last supported version: 2.2.7