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r-mobster

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Model-based subclonal deconvolution from bulk sequencing.

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::r-mobster

Usage Tracking

0.1.1
1 / 8 versions selected
Downloads (Last 6 months): 0

Description

MOBSTER is a package that implements a statistical model for tumour subclonal deconvolution which combines Dirichlet mixtures with distributions predicted by theoretical population genetics. The model implemented is a parametric (finite) mixture with multiple Beta components, and one Pareto power law tail. Beta components capture mutations that rise up in frequency by positive selection, and the Pareto tail models alleles resulting from neutral, intra-clone, evolutionary dynamics.

About

Summary

Model-based subclonal deconvolution from bulk sequencing.

Last Updated

May 9, 2025 at 18:59

License

GPL-3.0-or-later

Total Downloads

429

Supported Platforms

noarch