CMD + K

r-mixkernel

Community

Kernel-based methods are powerful methods for integrating heterogeneous types of data. mixKernel aims at providing methods to combine kernel for unsupervised exploratory analysis. Different solutions are provided to compute a meta-kernel, in a consensus way or in a way that best preserves the original topology of the data. mixKernel also integrates kernel PCA to visualize similarities between samples in a non linear space and from the multiple source point of view. Functions to assess and display important variables are also provided in the package. Jerome Mariette and Nathalie Villa-Vialaneix (2017) <doi:10.1093/bioinformatics/btx682>.

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::r-mixkernel

Usage Tracking

0.9
0.8
0.7
0.6
0.5
5 / 8 versions selected
Downloads (Last 6 months): 0

About

Summary

Kernel-based methods are powerful methods for integrating heterogeneous types of data. mixKernel aims at providing methods to combine kernel for unsupervised exploratory analysis. Different solutions are provided to compute a meta-kernel, in a consensus way or in a way that best preserves the original topology of the data. mixKernel also integrates kernel PCA to visualize similarities between samples in a non linear space and from the multiple source point of view. Functions to assess and display important variables are also provided in the package. Jerome Mariette and Nathalie Villa-Vialaneix (2017) <doi:10.1093/bioinformatics/btx682>.

Last Updated

Sep 18, 2023 at 23:36

License

GPL (>= 2)

Total Downloads

18.6K

Supported Platforms

noarch

Unsupported Platforms

linux-64 Last supported version: 0.3
macOS-64 Last supported version: 0.3