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r-htscluster

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A Poisson mixture model is implemented to cluster genes from high- throughput transcriptome sequencing (RNA-seq) data. Parameter estimation is performed using either the EM or CEM algorithm, and the slope heuristics are used for model selection (i.e., to choose the number of clusters).

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::r-htscluster

Usage Tracking

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About

Summary

A Poisson mixture model is implemented to cluster genes from high- throughput transcriptome sequencing (RNA-seq) data. Parameter estimation is performed using either the EM or CEM algorithm, and the slope heuristics are used for model selection (i.e., to choose the number of clusters).

Last Updated

Sep 5, 2023 at 12:09

License

GPL (>= 3)

Total Downloads

7.9K

Supported Platforms

noarch