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Implements the necessary distributions and parameter estimation procedures for a model of amplification and high-troughput sequencing. The model is based on a mechanistic model of PCR amplification as a Galton-Watson branching process, and on Poissonan sampling to model high-throughput sequencing.

Installers

Info: This package contains files in non-standard labels.
  • osx-64 v1.0.4
  • linux-64 v1.0.4

conda install

To install this package run one of the following:
conda install bioconda::r-gwpcr
conda install bioconda/label/cf201901::r-gwpcr
conda install bioconda/label/gcc7::r-gwpcr

Description


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