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bioconda / packages / r-flanders 1.0.1

Fast colocalization using AnnData objects in R

Installers

  • noarch v1.0.1

conda install

To install this package run one of the following:
conda install bioconda::r-flanders

Description

flanders is an R package designed to seamlessly convert finemapping output files from the nf-flanders pipeline into a unified AnnData object and facilitate colocalization analysis. The package provides functions to: - Convert multiple *finemap.rds files into a single AnnData object with credible set metadata. - Generate an input table (coloc_input) for colocalization testing. - Run pairwise colocalization tests, with minimal runtime overhead (typically 5–10 tests per second on standard hardware).


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