pytximport

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pytximport - gene count estimation from transcript-level quantification

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Installation

To install this package, run one of the following:

Conda

$conda install bioconda::pytximport

Usage Tracking

Version

5 / 8 versions selected

Downloads (Last 6 months): 0

Description

pytximport is a Python port of tximport that allows users to import transcript counts from tools such as kallisto and Salmon, correct them for differential isoform usage, and summarize them at the gene level.

About

Summary

pytximport - gene count estimation from transcript-level quantification

Last Updated

Feb 26, 2026 at 02:04

License

GPL-3.0-only

Total Downloads

4.9K

Version Downloads

Supported Platforms

noarch

Home

https://pytximport.readthedocs.io/en/stable/start.html

GitHub Repository

https://github.com/complextissue/pytximport

Documentation

https://pytximport.readthedocs.io