kompot

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Differential abundance and gene expression analysis using Mahalanobis distance with JAX backend

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Installation

To install this package, run one of the following:

Conda

$conda install bioconda::kompot

Usage Tracking

Version

3 / 8 versions selected

Downloads (Last 6 months): 0

Description

Kompot performs differential abundance and differential gene expression analysis using Gaussian process-based methods with Mahalanobis distance. It features a fast JAX backend and supports both Python API and CLI.

About

Summary

Differential abundance and gene expression analysis using Mahalanobis distance with JAX backend

Last Updated

Nov 30, 2025 at 20:01

License

GPL-3.0-or-later

Total Downloads

115

Supported Platforms

noarch

Home

https://github.com/settylab/kompot

GitHub Repository

https://github.com/settylab/kompot

Documentation

https://kompot.readthedocs.io/