CMD + K

kmer-counter

Community

kmer-counter is an efficient kmer counter for large sequencing read sets.

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::kmer-counter

Usage Tracking

0.1.2
1 / 8 versions selected
Downloads (Last 6 months): 0

Description

This k-mer counter, based on Needletail's efficient FASTA parser is designed to tally k-mer counts for large sequencing read sets. It was written with downstream processing in TensorFlow or NumPy in mind, and stores the results in a npy file.

About

Summary

kmer-counter is an efficient kmer counter for large sequencing read sets.

Last Updated

Nov 15, 2025 at 08:31

License

MIT

Total Downloads

587

Supported Platforms

linux-64
linux-aarch64
macOS-64