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grenedalf

Community

Toolkit for Population Genetic Statistics from Pool-Sequenced Samples, e.g., in Evolve and Resequence experiments

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::grenedalf

Usage Tracking

0.6.3
0.6.2
0.6.1
0.6.0
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Downloads (Last 6 months): 0

Description

grenedalf is a collection of commands for working with population genetic data, in particular from pool sequencing. Its main focus are statistical analyses such as Tajima's D and Fst. The statistics follow the approaches of PoPoolation and PoPoolation2, as well as poolfstat and npstat. However, compared to those, grenedalf is significantly more scalable, more user friendly, and offers more settings and input file formats.

About

Summary

Toolkit for Population Genetic Statistics from Pool-Sequenced Samples, e.g., in Evolve and Resequence experiments

Last Updated

Jan 31, 2025 at 19:35

License

GPL-3.0-only

Total Downloads

3.7K

Supported Platforms

linux-aarch64
linux-64