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gapseq

Community

Informed prediction and analysis of bacterial metabolic pathways and genome-scale networks

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::gapseq

Usage Tracking

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Description

gapseq predicts bacterial metabolic pathways and reconstructs genome-scale metabolic models.

After installation, initialize the required databases with:

gapseq update-sequences -t Bacteria gapseq update-sequences -t Archaea

About

Summary

Informed prediction and analysis of bacterial metabolic pathways and genome-scale networks

Last Updated

May 21, 2026 at 14:46

License

AGPL-3.0-only

Supported Platforms

noarch

Unsupported Platforms

linux-64 Last supported version: 1.4.0