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fastppm

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Fast Perfect Phylogeny Mixture Regression using Tree-Structured Dual Dynamic Programming

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::fastppm

Usage Tracking

1.1.1
1.1.0
2 / 8 versions selected
Downloads (Last 6 months): 0

Description

fastppm (fast perfect phylogeny mixtures) is a C++/Python library for fast estimation of unknown frequency matrices, given variant and total read counts over an n-clonal tree.

About

Summary

Fast Perfect Phylogeny Mixture Regression using Tree-Structured Dual Dynamic Programming

Last Updated

Dec 5, 2025 at 13:36

License

MIT

Total Downloads

1.4K

Supported Platforms

linux-64
macOS-64
linux-aarch64
macOS-arm64