deepchopper
A Genomic Language Model for Chimera Artifact Detection in Nanopore Direct RNA Sequencing.
Installation
To install this package, run one of the following:
Usage Tracking
1.2.9
1.2.6
1.2.5
1.2.4
4 / 8 versions selected
Downloads (Last 6 months): 0
Description
DeepChopper is a genomic language model designed to identify artificial sequences. It provides functionality for encoding FASTQ files, making predictions, and chopping sequences.
About
Summary
A Genomic Language Model for Chimera Artifact Detection in Nanopore Direct RNA Sequencing.
Last Updated
Nov 19, 2025 at 17:42
License
Apache-2.0
Total Downloads
4.8K
Supported Platforms
linux-aarch64
linux-64
macOS-arm64
macOS-64
GitHub Repository
https://github.com/ylab-hi/DeepChopperDocumentation
https://github.com/ylab-hi/DeepChopper