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cascade-reg

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Causal discovery of gene regulatory programs from single-cell genomics

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::cascade-reg

Usage Tracking

0.5.1
1 / 8 versions selected
Downloads (Last 6 months): 0

Description

CASCADE stands for Causality-Aware Single-Cell Adaptive Discover/Deduction/Design Engine. It is a deep learning-based bioinformatics tool for causal gene regulatory network discovery, counterfactual perturbation effect prediction, and targeted intervention design based on high-content single-cell perturbation screens.

About

Summary

Causal discovery of gene regulatory programs from single-cell genomics

Last Updated

Sep 5, 2025 at 06:16

License

MIT

Total Downloads

57

Supported Platforms

noarch