This tool enables a user to filter VCF files.
This tool enables a user to filter VCF files. For example on sample depth and/or total depth. It can also be used to filter out the reference calls and/or minimum number of sample passes. There is a wide set of options which one can use to change the filter settings.
For documentation and manuals visit our github.io page: https://biopet.github.io/vcffilter