bioconda / packages / bioconductor-tvtb 1.14.0

TVTB: The VCF Tool Box

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.6.0
  • osx-64  v1.6.0
  • noarch  v1.14.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-tvtb
conda install -c bioconda/label/gcc7 bioconductor-tvtb
conda install -c bioconda/label/cf201901 bioconductor-tvtb

Description

The package provides S4 classes and methods to filter, summarise and visualise genetic variation data stored in VCF files. In particular, the package extends the FilterRules class (S4Vectors package) to define news classes of filter rules applicable to the various slots of VCF objects. Functionalities are integrated and demonstrated in a Shiny web-application, the Shiny Variant Explorer (tSVE).

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