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bioconductor-tapseq

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Targeted scRNA-seq primer design for TAP-seq

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-tapseq

Usage Tracking

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Description

Design primers for targeted single-cell RNA-seq used by TAP-seq. Create sequence templates for target gene panels and design gene-specific primers using Primer3. Potential off-targets can be estimated with BLAST. Requires working installations of Primer3 and BLASTn.

About

Summary

Targeted scRNA-seq primer design for TAP-seq

Last Updated

Dec 30, 2024 at 03:24

License

MIT + file LICENSE

Total Downloads

15.9K

Supported Platforms

noarch