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bioconductor-spatialexperimentio

Community

Read in Xenium, CosMx, MERSCOPE or STARmapPLUS data as SpatialExperiment object

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-spatialexperimentio

Usage Tracking

1.2.0
1 / 8 versions selected
Downloads (Last 6 months): 0

Description

Read in imaging-based spatial transcriptomics technology data. Current available modules are for Xenium by 10X Genomics, CosMx by Nanostring, MERSCOPE by Vizgen, or STARmapPLUS from Broad Institute. You can choose to read the data in as a SpatialExperiment or a SingleCellExperiment object.

About

Summary

Read in Xenium, CosMx, MERSCOPE or STARmapPLUS data as SpatialExperiment object

Last Updated

Mar 3, 2026 at 00:29

License

Artistic-2.0

Total Downloads

16

Version Downloads

16

Supported Platforms

noarch