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bioconductor-spasim

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Spatial point data simulator for tissue images

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-spasim

Usage Tracking

1.8.0
1.4.0
1.2.1
1.0.0
4 / 8 versions selected
Total downloads: 0

Description

A suite of functions for simulating spatial patterns of cells in tissue images. Output images are multitype point data in SingleCellExperiment format. Each point represents a cell, with its 2D locations and cell type. Potential cell patterns include background cells, tumour/immune cell clusters, immune rings, and blood/lymphatic vessels.

About

Summary

Spatial point data simulator for tissue images

Information Last Updated

Apr 22, 2025 at 15:29

License

Artistic-2.0

Total Downloads

3.1K

Platforms

noarch Version: 1.8.0