bioconda / packages / bioconductor-sigsquared 1.26.0

Gene signature generation for functionally validated signaling pathways


Info: This package contains files in non-standard labels.

conda install

  • noarch  v1.26.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-sigsquared
conda install -c bioconda/label/gcc7 bioconductor-sigsquared


By leveraging statistical properties (log-rank test for survival) of patient cohorts defined by binary thresholds, poor-prognosis patients are identified by the sigsquared package via optimization over a cost function reducing type I and II error.

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