bioconda / packages / bioconductor-shortread 1.40.0

This package implements sampling, iteration, and input of FASTQ files. The package includes functions for filtering and trimming reads, and for generating a quality assessment report. Data are represented as DNAStringSet-derived objects, and easily manipulated for a diversity of purposes. The package also contains legacy support for early single-end, ungapped alignment formats.

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.40.0
  • osx-64  v1.40.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-shortread
conda install -c bioconda/label/gcc7 bioconductor-shortread
conda install -c bioconda/label/cf201901 bioconductor-shortread

Description

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