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bioconductor-seqinfo

Community

A simple S4 class for storing basic information about a collection of genomic sequences

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-seqinfo

Usage Tracking

1.0.0
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Downloads (Last 6 months): 0

Description

The Seqinfo class stores the names, lengths, circularity flags, and genomes for a particular collection of sequences. These sequences are typically the chromosomes and/or scaffolds of a specific genome assembly of a given organism. Seqinfo objects are rarely used as standalone objects. Instead, they are used as part of higher-level objects to represent their seqinfo() component. Examples of such higher-level objects are GRanges, RangedSummarizedExperiment, VCF, GAlignments, etc... defined in other Bioconductor infrastructure packages.

About

Summary

A simple S4 class for storing basic information about a collection of genomic sequences

Last Updated

Feb 9, 2026 at 09:23

License

Artistic-2.0

Supported Platforms

noarch