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bioconductor-scthi

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Indentification of significantly activated ligand-receptor interactions across clusters of cells from single-cell RNA sequencing data

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-scthi

Usage Tracking

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Description

scTHI is an R package to identify active pairs of ligand-receptors from single cells in order to study,among others, tumor-host interactions. scTHI contains a set of signatures to classify cells from the tumor microenvironment.

About

Summary

Indentification of significantly activated ligand-receptor interactions across clusters of cells from single-cell RNA sequencing data

Last Updated

Dec 15, 2024 at 01:17

License

GPL-2

Total Downloads

15.3K

Supported Platforms

noarch