bioconda / packages / bioconductor-scran 1.16.0

Methods for Single-Cell RNA-Seq Data Analysis

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.16.0
  • osx-64  v1.16.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-scran
conda install -c bioconda/label/gcc7 bioconductor-scran
conda install -c bioconda/label/cf201901 bioconductor-scran

Description

Implements functions for low-level analyses of single-cell RNA-seq data. Methods are provided for normalization of cell-specific biases, assignment of cell cycle phase, detection of highly variable and significantly correlated genes, identification of marker genes, and other common tasks in routine single-cell analysis workflows.

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