bioconda / packages / bioconductor-ripat 1.4.0

Retroviral Integration Pattern Analysis Tool (RIPAT)

Installers

conda install

  • noarch  v1.4.0
To install this package with conda run:
conda install -c bioconda bioconductor-ripat

Description

RIPAT is developed as an R package for retroviral integration sites annotation and distribution analysis. RIPAT needs local alignment results from BLAST and BLAT. Specific input format is depicted in RIPAT manual. RIPAT provides RV integration pattern analysis result as forms of R objects, excel file with multiple sheets and plots.


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