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bioconductor-peacoqc

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Peak-based selection of high quality cytometry data

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-peacoqc

Usage Tracking

1.16.0
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Downloads (Last 6 months): 0

Description

This is a package that includes pre-processing and quality control functions that can remove margin events, compensate and transform the data and that will use PeacoQCSignalStability for quality control. This last function will first detect peaks in each channel of the flowframe. It will remove anomalies based on the IsolationTree function and the MAD outlier detection method. This package can be used for both flow- and mass cytometry data.

About

Summary

Peak-based selection of high quality cytometry data

Last Updated

Dec 28, 2024 at 00:02

License

GPL (>=3)

Total Downloads

13.1K

Supported Platforms

noarch