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bioconductor-oppar

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Outlier profile and pathway analysis in R

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-oppar

Usage Tracking

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Description

The R implementation of mCOPA package published by Wang et al. (2012). Oppar provides methods for Cancer Outlier profile Analysis. Although initially developed to detect outlier genes in cancer studies, methods presented in oppar can be used for outlier profile analysis in general. In addition, tools are provided for gene set enrichment and pathway analysis.

About

Summary

Outlier profile and pathway analysis in R

Last Updated

Dec 26, 2024 at 20:09

License

GPL-2

Total Downloads

51.3K

Supported Platforms

linux-64
macOS-64
linux-aarch64