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bioconductor-nanoporernaseq

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Nanopore RNA-Seq Example data

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-nanoporernaseq

Usage Tracking

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Description

The NanoporeRNASeq package contains long read RNA-Seq data generated using Oxford Nanopore Sequencing. The data consists of 6 samples from two human cell lines (K562 and MCF7) that were generated by the SG-NEx project. Each of these cell lines has three replicates, with 1 direct RNA sequencing data and 2 cDNA sequencing data. Reads are aligned to chromosome 22 (Grch38) and stored as bam files. The original data is from the SG-NEx project.

About

Summary

Nanopore RNA-Seq Example data

Last Updated

Dec 8, 2023 at 13:38

License

GPL-3 + file LICENSE

Total Downloads

13.0K

Supported Platforms

noarch