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bioconda / packages / bioconductor-nanoporernaseq 1.12.0

Nanopore RNA-Seq Example data

Installers

  • noarch v1.12.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-nanoporernaseq

Description

The NanoporeRNASeq package contains long read RNA-Seq data generated using Oxford Nanopore Sequencing. The data consists of 6 samples from two human cell lines (K562 and MCF7) that were generated by the SG-NEx project. Each of these cell lines has three replicates, with 1 direct RNA sequencing data and 2 cDNA sequencing data. Reads are aligned to chromosome 22 (Grch38) and stored as bam files. The original data is from the SG-NEx project.


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