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bioconductor-msigdb

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An ExperimentHub Package for the Molecular Signatures Database (MSigDB)

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-msigdb

Usage Tracking

1.14.0
1.10.0
1.8.0
1.6.0
1.2.0
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Total downloads: 0

Description

This package provides the Molecular Signatures Database (MSigDB) in a R accessible objects. Signatures are stored in GeneSet class objects form the GSEABase package and the entire database is stored in a GeneSetCollection object. These data are then hosted on the ExperimentHub. Data used in this package was obtained from the MSigDB of the Broad Institute. Metadata for each gene set is stored along with the gene set in the GeneSet class object.

About

Summary

An ExperimentHub Package for the Molecular Signatures Database (MSigDB)

Information Last Updated

Apr 22, 2025 at 15:29

License

CC BY 4.0

Total Downloads

10.8K

Platforms

noarch Version: 1.14.0