bioconda / packages / bioconductor-msigdb 1.2.0

An ExperimentHub Package for the Molecular Signatures Database (MSigDB)

Installers

conda install

  • noarch  v1.2.0
To install this package with conda run:
conda install -c bioconda bioconductor-msigdb

Description

This package provides the Molecular Signatures Database (MSigDB) in a R accessible objects. Signatures are stored in GeneSet class objects form the GSEABase package and the entire database is stored in a GeneSetCollection object. These data are then hosted on the ExperimentHub. Data used in this package was obtained from the MSigDB of the Broad Institute. Metadata for each gene set is stored along with the gene set in the GeneSet class object.


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