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bioconductor-metabcombiner

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Method for Combining LC-MS Metabolomics Feature Measurements

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-metabcombiner

Usage Tracking

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Description

This package aligns LC-HRMS metabolomics datasets acquired from biologically similar specimens analyzed under similar, but not necessarily identical, conditions. Peak-picked and simply aligned metabolomics feature tables (consisting of m/z, rt, and per-sample abundance measurements, plus optional identifiers & adduct annotations) are accepted as input. The package outputs a combined table of feature pair alignments, organized into groups of similar m/z, and ranked by a similarity score. Input tables are assumed to be acquired using similar (but not necessarily identical) analytical methods.

About

Summary

Method for Combining LC-MS Metabolomics Feature Measurements

Last Updated

Dec 18, 2024 at 02:08

License

GPL-3

Total Downloads

18.3K

Supported Platforms

linux-64
macOS-64