bioconda / packages / bioconductor-m3d 1.22.0

Identifies differentially methylated regions across testing groups


Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.22.0
  • osx-64  v1.22.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-m3d
conda install -c bioconda/label/gcc7 bioconductor-m3d
conda install -c bioconda/label/cf201901 bioconductor-m3d


This package identifies statistically significantly differentially methylated regions of CpGs. It uses kernel methods (the Maximum Mean Discrepancy) to measure differences in methylation profiles, and relates these to inter-replicate changes, whilst accounting for variation in coverage profiles.

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