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bioconda / packages / bioconductor-m3d 1.22.0

Identifies differentially methylated regions across testing groups

Installers

Info: This package contains files in non-standard labels.
  • linux-64 v1.22.0
  • osx-64 v1.22.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-m3d
conda install bioconda/label/cf201901::bioconductor-m3d
conda install bioconda/label/gcc7::bioconductor-m3d

Description

This package identifies statistically significantly differentially methylated regions of CpGs. It uses kernel methods (the Maximum Mean Discrepancy) to measure differences in methylation profiles, and relates these to inter-replicate changes, whilst accounting for variation in coverage profiles.


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