• License: Artistic-2.0
• Home: https://bioconductor.org/packages/3.18/bioc/html/lefser.html
• 10315 total downloads
• Last upload: 11 months and 10 days ago

Description

lefser is an implementation in R of the popular "LDA Effect Size (LEfSe)" method for microbiome biomarker discovery. It uses the Kruskal-Wallis test, Wilcoxon-Rank Sum test, and Linear Discriminant Analysis to find biomarkers of groups and sub-groups.