• License: Artistic-2.0
• Home: https://bioconductor.org/packages/3.20/bioc/html/lefser.html
• 10874 total downloads
• Last upload: 8 days and 7 hours ago

Description

lefser is the R implementation of the popular microbiome biomarker discovery too, LEfSe. It uses the Kruskal-Wallis test, Wilcoxon-Rank Sum test, and Linear Discriminant Analysis to find biomarkers from two-level classes (and optional sub-classes).