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bioconda / packages / bioconductor-hireadsprocessor 1.38.0

Functions to process LM-PCR reads from 454/Illumina data

Installers

Info: This package contains files in non-standard labels.
  • noarch v1.38.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-hireadsprocessor
conda install bioconda/label/gcc7::bioconductor-hireadsprocessor

Description

hiReadsProcessor contains set of functions which allow users to process LM-PCR products sequenced using any platform. Given an excel/txt file containing parameters for demultiplexing and sample metadata, the functions automate trimming of adaptors and identification of the genomic product. Genomic products are further processed for QC and abundance quantification.


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