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bioconductor-geometrid

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A R/Bioconductor package for interactive 3D plot of epigenetic data or single cell data

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-geometrid

Usage Tracking

1.4.1
1 / 8 versions selected
Downloads (Last 6 months): 0

Description

The geomeTriD (Three-Dimensional Geometry) Package provides interactive 3D visualization of chromatin structures using the WebGL-based 'three.js' (https://threejs.org/) or the rgl rendering library. It is designed to identify and explore spatial chromatin patterns within genomic regions. The package generates dynamic 3D plots and HTML widgets that integrate seamlessly with Shiny applications, enabling researchers to visualize chromatin organization, detect spatial features, and compare structural dynamics across different conditions and data types.

About

Summary

A R/Bioconductor package for interactive 3D plot of epigenetic data or single cell data

Last Updated

Mar 4, 2026 at 00:56

License

MIT + file LICENSE

Supported Platforms

noarch