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bioconda / packages / bioconductor-expressionatlas 1.30.0

Download datasets from EMBL-EBI Expression Atlas

Installers

Info: This package contains files in non-standard labels.
  • noarch v1.30.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-expressionatlas
conda install bioconda/label/gcc7::bioconductor-expressionatlas

Description

This package is for searching for datasets in EMBL-EBI Expression Atlas, and downloading them into R for further analysis. Each Expression Atlas dataset is represented as a SimpleList object with one element per platform. Sequencing data is contained in a SummarizedExperiment object, while microarray data is contained in an ExpressionSet or MAList object.


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