bioconductor-escape
Easy single cell analysis platform for enrichment
Easy single cell analysis platform for enrichment
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A bridging R package to facilitate gene set enrichment analysis (GSEA) in the context of single-cell RNA sequencing. Using raw count information, Seurat objects, or SingleCellExperiment format, users can perform and visualize ssGSEA, GSVA, AUCell, and UCell-based enrichment calculations across individual cells. Alternatively, escape supports use of rank-based GSEA, such as the use of differential gene expression via fgsea.
Summary
Easy single cell analysis platform for enrichment
Last Updated
Mar 1, 2026 at 00:53
License
MIT + file LICENSE
Total Downloads
14.6K
Version Downloads
30
Supported Platforms